ProteinIQ for molecular dynamics
Simulate biomolecular motion
Run advanced MD simulations and steered dynamics to understand protein behavior and conformational changes over time.
Join 1,200+ researchers using ProteinIQ
01 — Challenges
Challenges we solve
Common obstacles researchers face and how ProteinIQ addresses them.
Simulate protein conformational dynamics
Study protein-ligand interaction stability
Analyze trajectory data and binding events
Validate structural predictions with dynamics
02 — Workflow
How it works
A streamlined workflow from input to results.
1
Upload Structure
Provide starting PDB structure for simulation
2
System Setup
Automated solvation, ionization, and minimization
3
Run Simulation
Execute MD on cloud GPUs with progress tracking
4
Analyze Trajectory
Visualize dynamics, compute RMSD/RMSF, export data
03 — Comparison
Traditional methods vs. ProteinIQ
See how we compare to traditional computational approaches.
| Aspect | Traditional | ProteinIQ |
|---|---|---|
| Infrastructure | Dedicated GPU cluster required | On-demand cloud GPUs |
| System preparation | Manual scripting for setup | Automated preparation pipeline |
| Analysis tools | Command-line tools, custom scripts | Integrated visualization and analysis |
| Cost model | Fixed infrastructure costs | Pay only for simulation time |
04 — Explore more
Related solutions
Discover complementary workflows to enhance your research.