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ProteinIQ

Bioinformatics tools and workflows for everyone

Design, fold, dock, simulate, and analyze biomolecules at research speed in your browser.

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The ProteinIQ workspace showing a biomolecular docking result with ranked posesThe ProteinIQ workspace showing a biomolecular docking result with ranked poses

Join 10,000+ of the world's most ambitious researchers advancing life science.

Folding
Design
Docking
Simulation
Alignment
Screening
Analysis
Utilities
Researchers at work today
Researchers10,000+Jobs submitted25,000Tools available243Institutions worldwide40+
Researchers10,000+Jobs submitted25,000Tools available243Institutions worldwide40+

From first input to final insight

Run 230+ tools, build workflows, and understand every result in one place.

  1. [01]Browse tools
    A bioinformatics tool running in the ProteinIQ workspaceA bioinformatics tool running in the ProteinIQ workspace

    Run 230+ tools in your browser.

    Run protein folding, protein design, molecular docking, molecular dynamics, and protein analysis in your browser, without local installs or hardware.

  2. [02]Build a workflow
    A multi-step workflow in the ProteinIQ editorA multi-step workflow in the ProteinIQ editor

    Connect tools into workflows.

    Pass results between compatible tools in scientifically plausible workflows and see the total cost before the run starts.

  3. [03]Explore the API
    curl -X POST https://proteiniq.io/api/v1/jobs \
      -H "Authorization: Bearer $PROTEINIQ_API_KEY" \
      -H "Content-Type: application/json" \
      -d '{
        "tool": "esmfold",
        "name": "Lysozyme ESMFold run",
        "input": {
          "inputs": [{
            "id": "seqs_1",
            "slotId": "protein",
            "kind": "protein",
            "format": "fasta",
            "content": ">lysozyme\nKVFGRCELAAAMKRHGLDNYRGYSLG",
            "source": { "type": "text" }
          }]
        },
        "settings": {}
      }'

    Submit runs through one API.

    List tools, estimate costs, submit jobs, follow progress, and download results from code.

  4. [04]Open assistant
    The ProteinIQ assistant interpreting a result tableThe ProteinIQ assistant interpreting a result table

    Let the AI assistant help.

    Analyze results, troubleshoot failed runs, plan follow-up analyses, and submit jobs with your approval.

Latest customer stories

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  • Published Research

    AUG '26

    How PepGate narrowed 30 peptides to one lead

    ProteinIQ stability screening helped researchers compare AI-designed ACE inhibitors before biochemical and animal testing.

    Journal of Medicinal Chemistry Zhejiang University

  • Antimicrobial Peptides

    JUL '26

    Insect antimicrobial peptide structures predicted with Chou-Fasman

    Researchers used ProteinIQ's Chou-Fasman tool to predict secondary structures for five insect-derived antimicrobial peptide candidates before experimental testing.

    Antibiotics Jiangsu Academy of Agricultural Sciences

  • Structure Prediction

    MAY '26

    Coa6-CoQ10 binding site modeled with Protenix

    Researchers used Protenix to model how CoQ10 binds Coa6 in a mouse study of mitochondrial memory impairment.

    Translational Neurodegeneration The Fourth Military Medical University

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ProteinIQ

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