Bioinformatics in your browser
Design, fold, dock, simulate, and analyze biomolecules without having to download anything or rent GPUs.
How ProteinIQ works
ProteinIQ offers a new approach to bioinformatics. Built for scientists, ProteinIQ brings state-of-the-art tools together to help you design, fold, dock, simulate, and analyze in browser.
- 001
Choose a tool
Find the right method for your question, from structure prediction to molecular docking and sequence analysis.
- 002
Add your inputs & configure
Paste a sequence or upload your files, adjust the settings, then let ProteinIQ handle the computing.
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Analyze your results
Inspect structures and scores in your browser, download your results, or use them in your next analysis.
Run 230+ tools in your browser
Fold, design, dock, simulate, and analyze biomolecules in your browser. Bring your sequences and structures, choose your settings, and explore results without local installs.
Browse tools
Connect tools into workflows
Pass results between compatible tools without moving files by hand. Configure each step, see the total cost, and follow your analysis from input to output.
Build a workflow
Run your analyses in batches
Apply a tool across multiple inputs in one batch. Follow each job’s progress and keep the results together, without setting up every run individually.
Run a batchSubmit runs through one API
Connect your scripts and research pipelines to ProteinIQ. Discover tools, estimate costs, submit jobs, and retrieve results through one API.
Get API keyPOST /jobs
{
"tool": "boltz-2",
"inputs": ["protein.fasta"],
"settings": {
"samples": 5
}
}{
"id": "job_01JX7K2",
"status": "queued",
"credits": 50,
"links": {
"status": "/jobs/job_01JX7K2"
}
}Discover available tools
Submit an analysis
Follow job progress
Retrieve your results
Let the AI assistant help
Interpret results, troubleshoot runs, and plan your next analysis with the assistant. Prepare follow-up jobs in the same workspace, with your approval before submission.
Ask AI assistant
A word from the founder
Scientists should be able to try a promising computational method without first becoming experts in installing and running it. Yet trying a tool from a paper can mean days of software setup, finding GPU access, and moving files between analyses.
We’re building ProteinIQ so you can get right to researching. Start with a sequence, predict its structure, and explore potential binding partners. Design variants, compare candidates, and investigate their behavior with molecular dynamics. Use what you learn to choose your next experiment and share with your teammates.
Over 230 bioinformatics tools share one browser-based workspace. Run a single analysis, test candidates in batches, or connect tools into workflows. Your files and results stay together in the cloud, ready for the next question.
Our aim is to shorten the distance between reading about a method and using it to investigate your own question.
The tools for your next discovery.
From a first sequence to your next experiment. Explore the tools that bring each step of your research together.
Research happens here
A shared drive to discover.
From a single sequence to an entire study, explore what comes next.
- Researchers
- 11,700
- Jobs submitted
- 25,000
- Tools available
- 243
- Institutions worldwide
- 40+
From the research community
What people are saying about ProteinIQ.
Public posts about the tools, workflows, and research made with ProteinIQ.
inThe docking interface is easy and trustworthy.
A study screening insect-derived antimicrobial peptides used ProteinIQ’s Chou–Fasman tool to predict peptide secondary structure.
ParaSurf is live on proteinIQ.io!
inHaving separate tools integrated into one single dashboard made it incredibly straightforward to manage the entire workflow
Researchers used ProteinIQ’s Protenix server to predict a Coa6–CoQ10 complex in a study of neuronal mitochondrial dysfunction and working memory.
I performed reverse translation with the help of ProteinIQ
An overview of diffusion models in drug discovery features ProteinIQ and its browser-based workflow for running molecular design tools.
Researchers used ProteinIQ to calculate physicochemical properties of plant-derived peptides, including theoretical pI, instability index, aliphatic index, and GRAVY.
A study of PET-hydrolysing enzymes cites ProteinIQ’s SASA calculator in its supporting information for comparing active-site accessibility.
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The research platform built for discovery
Run 230+ bioinformatics tools, build workflows, and understand every result in one place.
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