Antibody engineering workflows
Engineer antibody candidates with evidence at every step
Number variable regions, review humanness and developability, predict structures, model antibody-antigen complexes, and keep every output tied to the sequence it supports.
Built for antibody engineering
Antibody campaigns often move between sequence annotation, germline context, humanness review, developability screening, structure prediction, binding-site inspection, and complex modeling. The hard part is keeping those outputs comparable without turning every question into a local tooling project.
Faithful upstream wrappers
ProteinIQ wraps antibody tools without replacing their scoring, numbering, defaults, or output conventions with hidden local logic.
Sequence and structure continuity
Heavy chains, light chains, tables, modeled structures, and downstream complex outputs stay connected across workflow steps.
Built for review, not black boxes
The page organizes annotation, triage, modeling, docking, and design outputs so scientists can inspect the evidence behind a candidate.
Realistic antibody engineering scope
ProteinIQ helps prioritize and organize computational evidence; experimental binding, expression, immunogenicity, and developability assays remain essential.
Heavy-chain, light-chain, paired, nanobody, and repertoire-style inputs need different preparation and interpretation rules.
Numbering, germline calls, liability screens, language-model outputs, structures, and docking results are easy to separate from the sequence they came from.
Engineering decisions need inspectable evidence: upstream tables, residue annotations, structures, confidence scores, logs, and downloadable files.
Annotate, triage, model, and export
Move from antibody sequence or structure inputs to numbered regions, humanness and developability evidence, modeled structures, complexes, and exportable review packets.
Review humanization evidence
Compare humanness and humanization signals while keeping each score and residue-level output tied to its input sequence.
Model antibody structures
Predict antibody or nanobody structures from sequence, inspect model confidence, and export the generated structure files.
Explore antibody-antigen binding
Route paired chains and antigen structures into complex modeling or docking workflows, then inspect scores and structures together.
Questions & answers
Start antibody engineering in ProteinIQ
Free
Includes:
- 100 credits
- 3 jobs per day
- 1 concurrent job
- 1 workflow
- 1 seat
- Core tool features
- Academic license
Lite
Everything Free, plus:
- 500 credits / month
- No daily job limit
- 2 concurrent jobs
- 3 workflows
- Advanced tool settings
- AI assistant, SVG export, batch runs, and workflows
Plus
Everything Lite, plus:
- 2,000 credits / month
- 5 concurrent jobs
- 5 workflows
Pro
Best valueEverything Plus, plus:
- 8,000 credits / month
- 10 concurrent jobs
- 20 workflows
- Commercial license