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ProteinIQ docs

Run your first analysis, organize your research, and get more from ProteinIQ.

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Start guide

Your first analysis

Run Protein parameters with an example sequence, then inspect and download your results.

  1. 1
    Choose a toolFind the right analysis for your data.
  2. 2
    Add your inputReview settings and the credit cost.
  3. 3
    Explore your resultsInspect, save, and download outputs.
Follow the start guide

Understand the basics

Learn how tools, jobs, files, and workspaces fit together.

Explore concepts

Build with the API

Submit analyses and bring results into your scripts and notebooks.

Read the API docs

Explore the documentation

Find the details you need for the task at hand.

Guides and troubleshooting

  • Preparing inputsPrepare sequences, structures, and molecules.
  • Repair and validate a structureConnect two analyses and share the result.
  • Troubleshooting analysesInvestigate errors and missing results.

Research tools

  • AI AssistantUse research context and review tool proposals.
  • Database searchFind source records and download data.
  • ViewersInspect structures and alignments.

Work and files

  • ProjectsKeep related research together.
  • JobsTrack analyses and revisit results.
  • Files and collectionsSave, organize, and reuse your files.
  • BatchesRepeat an analysis across a dataset.
  • WorkflowsConnect analyses and review their runs.

Plans and credits

  • CreditsBalances, grants, and usage records.
  • Job credit usageCharges, runtime costs, and refunds.
  • Workflow credit usageEstimates and spending limits.
  • Pricing and billingCompare plans and included features.
  • Billing and invoicesPayments, invoices, and billing settings.

Workspace and account

  • Workspaces and seatsMembers, ownership, and seat limits.
  • Sharing and permissionsChoose who can access a result.
  • Cancellation and renewalsCancel or resume your subscription.
  • Account deletionWhat to check before you delete.
Tool guidesLearn the science behind each analysis.ChangelogSee what’s new in ProteinIQ.Contact supportGet help with your next step.
Get started
WelcomeStart guideConceptsPreparing inputsRepair and validate a structure
Work and files
ProjectsJobsFiles and collectionsWorkflowsTroubleshooting analyses
Batches
OverviewCreating a batchCSV batchesPairing and combinationsBatch examplesCSV referenceCSV format and limits
Research tools
AI AssistantDatabase searchViewers
Plans and credits
CreditsJob credit usageWorkflow credit usagePricing and billingBilling and invoices
Workspace and account
Workspaces and seatsSharing and permissionsCancellation and renewalsAccount deletion
Appearance
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