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Analysis

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Properties

Protein parameters AA composition GC content Molecular descriptors Molecular weight Extinction coefficient Isoelectric point Instability index Aliphatic index GRAVY Radius of gyration Chou-Fasman Protein stability PROPKA 3 MolProbity DSSP RMSD calculator SASA calculator

Screening

Lipinski's rule of 5 QEPPI ADMET-AI Toxicity

Alignment

Mafft Clustal Omega MUSCLE5 FastTree IQ-TREE FoldSeek HMMER MMseqs2 USAlign

App

Amino acid composition

Amino acid composition example image

Amino acid composition

Calculate the percentage and frequency of each amino acid in protein sequences

sequence-analysis physicochemical-properties protein