Protein
IQ
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Protein
IQ
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RFOptimization
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Starting complex
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PDB, ENT, CIF · up to 50 MB
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Optimization
Number of cycles
RF3 backprop fraction
RF3 backprop objective
pae_interface_mean
Random seed
Sequence design (MPNN)
MPNN model
ProteinMPNN
MPNN samples per cycle
MPNN sampling temperature
Boltz-2 cycles
Boltz diffusion samples
pLDDT threshold for fixed residues
Chain A is cyclic
MSAs and templates
Chain for each MSA file
Selection for each template file
Batch pairing
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from 22 credits/min
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