Protein
IQ
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Project
Inputs
Protein
IQ
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Batch setup
Tool
PocketFlow
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Inputs
Template
CSV / Excel
Paste CSV
Pocket input
Full protein + reference ligand
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Protein structure
Upload files
or drag and drop
PDB, ENT · up to 50 MB
Reference ligand pose
Upload files
or drag and drop
SDF, MOL · up to 10 MB
Generation settings
Pocket cutoff
Pretrained model
ZINC (drug-like)
Output mode
Interactive viewer
Number of molecules
Maximum atoms
Sampling parameters
Atom temperature
Bond temperature
Greedy focus selection
Initial protein-ligand distance
Min bond length
Max bond length
Max double bonds in 6-rings
Batch pairing
All combinations
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