Protein
IQ
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Tool
Name
Project
Inputs
Protein
IQ
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Batch setup
Tool
BoltzGen
Name
Project
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Inputs
Template
CSV / Excel
Paste CSV
Protocol
Peptide binder
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Target protein
Upload files
or drag and drop
PDB, ENT, CIF, MMCIF · up to 50 MB
Number of designs
Budget
Uniform binder size
Edit
Binding site (optional)
Cyclic peptide
Target chains (optional)
Advanced settings
Skip inverse folding
Sequences per backbone
Avoid amino acids
Quality vs diversity (alpha)
Filter biased compositions
Refolding RMSD threshold (Å)
Custom filters
Metrics weights
Size buckets
Step scale
Noise scale
Model checkpoint
Both (diverse + adherence)
Secondary structure
Disulfide bonds
Staple bonds
Fixed sequence regions
Binding residues
Non-binding residues
Residue constraints
45 credits/min
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